270071 PLN02906
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
270071 chr_22 PLN02906 335441 340375 + PLN02906

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0165

Most Highly Correlated Transcripts

bd392

(bd392) DEXDc
0.9004

262824

COG4581
0.8601

264610

Prolidase
0.8478

2742

DUF1336 superfamily
0.837

12836

EEP superfamily
0.8307

10554

hypothetical protein
0.8274

bd874

(bd874) NA
0.827

270222

0.8205

8140

hypothetical protein
0.813

bd1091

(bd1091) NA
0.8121

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ald_Xan_dh_C2 superfamily Molybdopterin-binding domain of aldehyde dehydrogenase; Molybdopterin-binding domain of aldehyde... - 556.505 0 682 - 1225 superfamily 251506
Ald_Xan_dh_C2 superfamily Molybdopterin-binding domain of aldehyde dehydrogenase; Molybdopterin-binding domain of aldehyde... - 556.505 0 682 - 1225 superfamily 251506
FAD_binding_5 FAD binding domain in molybdopterin dehydrogenase; FAD binding domain in molybdopterin... cl19922 159.238 4.22E-44 192 - 377 specific 250245
FAD_binding_4 superfamily FAD binding domain; This family consists of various enzymes that use FAD as a co-factor, most of... - 159.238 4.22E-44 192 - 377 superfamily 268275
Ald_Xan_dh_C Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; Aldehyde oxidase and xanthine... cl03161 113.889 6.14E-29 541 - 649 specific 250528
Ald_Xan_dh_C superfamily Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; Aldehyde oxidase and xanthine... - 113.889 6.14E-29 541 - 649 superfamily 261615
CO_deh_flav_C CO dehydrogenase flavoprotein C-terminal domain; CO dehydrogenase flavoprotein C-terminal domain. cl08390 112.216 1.69E-28 387 - 489 specific 251962
CO_deh_flav_C superfamily CO dehydrogenase flavoprotein C-terminal domain; CO dehydrogenase flavoprotein C-terminal domain. - 112.216 1.69E-28 387 - 489 superfamily 263623
Fer2_2 superfamily [2Fe-2S] binding domain; [2Fe-2S] binding domain. - 110.265 3.20E-28 28 - 97 superfamily 250876
Fer2_2 superfamily [2Fe-2S] binding domain; [2Fe-2S] binding domain. - 110.265 3.20E-28 28 - 97 superfamily 250876

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15968 PHATRDRAFT_15968 209625 320566 109218 Cre12.g545101.t1.1 AT4G34900.1 295142

KEGG

KEGG description KEGG Pathway
Peroxisome map04146

GO Terms

GO:0006118 GO:0016491 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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