270110 YvcK_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
270110 chr_22 YvcK_like 854708 857312 + YvcK_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7448233 Thaps270110.1, Thaps270110.4, Thaps270110.3, Thaps270110.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0187

Most Highly Correlated Transcripts

2927

hypothetical protein
0.9173

2540

hypothetical protein
0.9084

34100

GlcNAc superfamily
0.9082

6028

NA
0.9058

263397

(PGAM4) HP_PGM_like
0.9051

24334

EXS superfamily
0.902

262348

53EXOc
0.8986

262459

Glyco_transf_22 superfamily
0.8963

21223

hypothetical protein
0.8926

21958

hypothetical protein
0.8923

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
YvcK_like family of mostly uncharacterized proteins similar to B.subtilis YvcK; One member of this protein... cl00425 209.73 2.43E-62 99 - 446 specific 132873
CofD_YvcK superfamily Family of CofD-like proteins and proteins related to YvcK; CofD is a 2-phospho-L-lactate... - 209.73 2.43E-62 99 - 446 superfamily 260415

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre01.g033700.t1.2 AT2G34090.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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