270138 (GLNN) GSIII_N superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
270138 chr_24 (GLNN) GSIII_N superfamily 51645 54417 + GSIII_N superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448923 Thaps270138.1, Thaps270138.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0203

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0146
 0.45

Most Highly Correlated Transcripts

22565

UhpC
0.8961

268965

(acnB) PLN00094
0.8607

22213

(PFK2) PFK superfamily
0.8294

20641

hypothetical protein
0.823

264891

Glyco_hydro_30 superfamily
0.8211

932

Choline_transpo superfamily
0.8176

11615

PRK15061
0.8125

11411

(CSN1) CS_ACL-C_CCL superfamily
0.8116

33859

pntA
0.7997

268958

hypothetical protein
0.7961

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GSIII_N superfamily Glutamine synthetase type III N terminal; This domain family is found in bacteria and eukaryotes,... - 156.115 1.76E-44 9 - 100 superfamily 257048
Gln-synt_C superfamily Glutamine synthetase, catalytic domain; Glutamine synthetase, catalytic domain. - 119.627 3.04E-30 109 - 337 superfamily 249604

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_22357 PHATRDRAFT_22357 277211 23279 436026 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004356 GO:0006807 -

GO:0004356

glutamate-ammonia ligase activity

Details: 
Catalysis of the reaction: L-glutamate + ATP + NH(4)(+) = L-glutamine + ADP + 2 H(+) + phosphate.
GO Category: 
MF

GO:0006807

nitrogen compound metabolic process

Details: 
The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.
GO Category: 
BP

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