2705 COG2363Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
2705	chr_2	COG2363	1635649	1638253	-	COG2363

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443091	Thaps2705.7, Thaps2705.5, Thaps2705.2, Thaps2705.3, Thaps2705.1, Thaps2705.6, Thaps2705.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0144

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0051	0.39	0.0021 3.2

Most Highly Correlated Transcripts

20405 GRX_GRXh_1_2_like 0.8709	26769 ERG4_ERG24 superfamily 0.8639	bd1793 (bd1793) NA 0.8599	22468 hypothetical protein 0.8527	5315 hypothetical protein 0.8526	2862 HA 0.8484
6452 hypothetical protein 0.8468	3310 hypothetical protein 0.8461	3071 NA 0.8437	5921 hypothetical protein 0.8435

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG2363		Uncharacterized small membrane protein [Function unknown]	cl01008	113.928	1.82E-29	562 - 681	specific	225238
DUF423 superfamily		Protein of unknown function (DUF423); This family of proteins with unknown function is a possible...	-	113.928	1.82E-29	562 - 681	superfamily	260744

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_14373	PHATRDRAFT_14373	Not available	193871	Not available	Not available	Not available	524714

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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