2720 (Tp_HSF_3c) HSF_DNA-bind
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
2720 chr_2 (Tp_HSF_3c) HSF_DNA-bind 1678927 1681002 + HSF_DNA-bind
NCBI ID Ensembl Genomes exon ID
7443097 Thaps2720.3, Thaps2720.1, Thaps2720.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0114
Normalized Mean Residue
Thaps_bicluster_0291
0.48
(bd735) NA
0.8831
(bd1692) NA
0.8781
(bd1851) NA
0.8753
(bd737) NA
0.8479
hypothetical protein
0.8453
(bd1877) NA
0.8365
hypothetical protein
0.8175
(bd1935) NA
0.8173
(bd833) NA
0.8085
hypothetical protein
0.7966
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HSF_DNA-bind HSF-type DNA-binding; HSF-type DNA-binding. cl12113 119.527 6.35E-32 171 - 266 specific 249865
HSF_DNA-bind superfamily HSF-type DNA-binding; HSF-type DNA-binding. - 119.527 6.35E-32 171 - 266 superfamily 264552
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 449660 Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003700 GO:0005634 GO:0006355 GO:0003677 -

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF
Log in to post comments