28920 S_TKc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
28920 chr_7 S_TKc 818415 819508 + S_TKc

Synonyms

NCBI ID Ensembl Genomes exon ID
7449222 Thaps28920.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0496

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0056
 0.44

Most Highly Correlated Transcripts

bd739

(bd739) NA
0.9441

bd740

(bd740) NA
0.9366

bd1802

(bd1802) NA
0.9365

bd1803

(bd1803) NA
0.8796

24500

hypothetical protein
0.8556

bd1891

(bd1891) COG3899
0.8258

21661

hypothetical protein
0.8218

23374

hypothetical protein
0.8209

bd827

(bd827) NA
0.8069

7335

hypothetical protein
0.781

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases; Serine/Threonine Kinases (STKs),... cl09925 223.551 3.31E-71 70 - 322 specific 173660
PKc_like superfamily Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the... - 223.551 3.31E-71 70 - 322 superfamily 263920
S_TKc Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-... - 299.06 1.59E-100 63 - 323 multi-dom 214567

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004672 GO:0005524 GO:0006468 GO:0004713 GO:0004674 -

GO:0004672

protein kinase activity

Details: 
Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006468

protein phosphorylation

Details: 
The process of introducing a phosphate group on to a protein.
GO Category: 
BP

GO:0004713

protein tyrosine kinase activity

Details: 
Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
GO Category: 
MF

GO:0004674

protein serine/threonine kinase activity

Details: 
Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
GO Category: 
MF

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