3040 SRPBCC superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3040 chr_2 SRPBCC superfamily 2599260 2600333 - SRPBCC superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452132 Thaps3040.2, Thaps3040.3, Thaps3040.1, Thaps3040.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0356

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0059
 0.44

Most Highly Correlated Transcripts

bd833

(bd833) NA
0.9548

bd1851

(bd1851) NA
0.9143

263830

RNR_PFL superfamily
0.8796

264757

RNR_PFL superfamily
0.8765

38760

pyr_form_ly_1
0.8743

bd1954

(bd1954) NA
0.8701

bd1058

(bd1058) NA
0.8665

bd737

(bd737) NA
0.8521

bd884

(bd884) NA
0.8517

bd1756

(bd1756) NA
0.8463

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SRPBCC superfamily START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily; SRPBCC domains... - 68.0667 3.43E-14 91 - 260 superfamily 265438

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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