31011 Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31011 chr_1 Mito_carr 1163941 1165087 - Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7451502 Thaps31011.2, Thaps31011.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0036

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0112
 0.40

Most Highly Correlated Transcripts

bd1841

(bd1841) CAP10 superfamily
0.9209

bd1786

(bd1786) GLTP superfamily
0.9034

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9007

bd1808

(bd1808) NA
0.8884

bd1793

(bd1793) NA
0.8679

bd410

(bd410) HNHc
0.8629

bd693

(bd693) HSF_DNA-bind superfamily
0.8561

6701

hypothetical protein
0.8427

bd1760

(bd1760) ACAD superfamily
0.8422

bd1941

(bd1941) NA
0.8415

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 61.4963 2.49E-12 221 - 290 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 61.4963 2.49E-12 221 - 290 superfamily 249634

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available 562920

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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