31113 Cyt_c_Oxidase_VIb
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31113 chr_1 Cyt_c_Oxidase_VIb 2895680 2896186 + Cyt_c_Oxidase_VIb

Synonyms

NCBI ID Ensembl Genomes exon ID
7452583 Thaps31113.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0180

Most Highly Correlated Transcripts

11848

hypothetical protein
0.9538

23414

hypothetical protein
0.944

33348

IGPD superfamily
0.9382

8461

hypothetical protein
0.9329

3229

hypothetical protein
0.9319

22596

PLN02296
0.9306

21749

hypothetical protein
0.928

21599

NDUFA12 superfamily
0.9274

17747

rplO
0.9271

23960

hypothetical protein
0.9259

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Cyt_c_Oxidase_VIb Cytochrome c oxidase subunit VIb. Cytochrome c oxidase (CcO), the terminal oxidase in the... cl02794 83.1263 2.98E-21 97 - 164 specific 238466
Cyt_c_Oxidase_VIb superfamily Cytochrome c oxidase subunit VIb. Cytochrome c oxidase (CcO), the terminal oxidase in the... - 83.1263 2.98E-21 97 - 164 superfamily 261451

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11016 PHATRDRAFT_11016 267145 308383 432459 Cre06.g304350.t1.2 AT1G22450.1 Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004129 GO:0005739 GO:0006118 GO:0009481 GO:0009482 GO:0009483 GO:0009485 -

GO:0004129

cytochrome-c oxidase activity

Details: 
Catalysis of the reaction: 4 ferrocytochrome c + O2 + 4 H+ = 4 ferricytochrome c + 2 H2O.
GO Category: 
MF

GO:0005739

mitochondrion

Details: 
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
GO Category: 
CC

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0009481

NA

Details: 
NA
GO Category: 
NA

GO:0009482

NA

Details: 
NA
GO Category: 
NA

GO:0009483

NA

Details: 
NA
GO Category: 
NA

GO:0009485

NA

Details: 
NA
GO Category: 
NA

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