31747 SelR superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
31747	chr_2	SelR superfamily	822573	823208	+	SelR superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450225	Thaps31747.1, Thaps31747.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0100

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0037	0.54	0.29 0.0000000088

Most Highly Correlated Transcripts

1000 hypothetical protein 0.884	5584 P4Hc 0.8781	9907 hypothetical protein 0.8766	262193 FHA 0.8757	1857 p23_NUDC_like 0.8686	263536 P4Hc 0.8676
24906 hypothetical protein 0.8661	264492 Peptidase_C1A 0.8653	7696 2_5_RNA_ligase2 0.8627	20285 COG0694 0.8617

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SelR superfamily		SelR domain; Methionine sulfoxide reduction is an important process, by which cells regulate...	-	154.991	3.80E-48	61 - 175	superfamily	265802

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_13757	PHATRDRAFT_13757	269338	305529	207558	Not available	Not available	455513

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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