31993 DUF3449
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31993 chr_2 DUF3449 198652 201175 - DUF3449

Synonyms

NCBI ID Ensembl Genomes exon ID
7452175 Thaps31993.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0247

Most Highly Correlated Transcripts

29469

hypothetical protein
0.9481

3570

PP2Cc
0.9357

21288

dsDNA_bind
0.9342

20763

CAF1
0.9288

3348

hypothetical protein
0.9265

11848

hypothetical protein
0.9255

34925

SNF2_N
0.919

38736

S_TKc
0.9186

21749

hypothetical protein
0.9182

268257

fabG
0.9155

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF3449 superfamily Domain of unknown function (DUF3449); This presumed domain is functionally uncharacterized. This... - 217.148 2.83E-65 642 - 838 superfamily 256736
DUF3449 superfamily Domain of unknown function (DUF3449); This presumed domain is functionally uncharacterized. This... - 217.148 2.83E-65 642 - 838 superfamily 256736
Telomere_Sde2_2 superfamily Telomere stability C-terminal; This short C-terminal domain is found in higher eukaryotes further... - 80.6717 2.38E-18 537 - 595 superfamily 257634
Telomere_Sde2_2 superfamily Telomere stability C-terminal; This short C-terminal domain is found in higher eukaryotes further... - 80.6717 2.38E-18 537 - 595 superfamily 257634

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9319 PHATRDRAFT_9319 180252 63339 Not available Cre06.g297750.t1.2 AT5G06160.1 508363

KEGG

KEGG description KEGG Pathway
Spliceosome map03040

GO Terms

Not available -

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