32332 RPI_A
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32332 chr_2 RPI_A 1061227 1062262 + RPI_A

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps32332.3, Thaps32332.2, Thaps32332.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0015

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0288
 0.28

Most Highly Correlated Transcripts

32332

RPI_A
1

bd1645

(bd1645) tpt
0.962

270321

hypothetical protein
0.9599

bd1306

(bd1306) NA
0.9479

5434

hypothetical protein
0.9471

270304

hypothetical protein
0.9355

bd760

(bd760) ZnMc superfamily
0.9325

ThpsCp068

(psaL) photosystem I subunit XI
0.932

256250

hypothetical protein
0.932

268621

(PGM2) PLN02307
0.9316

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RPI_A RPI_A: Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible... cl00339 312.869 2.01E-107 41 - 267 specific 238692
SugarP_isomerase superfamily SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (... - 312.869 2.01E-107 41 - 267 superfamily 260367

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13382 PHATRDRAFT_13382 272607 245663 351398 Cre03.g187450.t1.2 AT3G04790.1 532575

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004751 GO:0009052 -

GO:0004751

ribose-5-phosphate isomerase activity

Details: 
Catalysis of the reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate.
GO Category: 
MF

GO:0009052

pentose-phosphate shunt, non-oxidative branch

Details: 
The branch of the pentose-phosphate shunt which does not involve oxidation reactions. It comprises a series of sugar phosphate interconversions, starting with ribulose 5-P and producing fructose 6-P and glyceraldehyde 3-P.
GO Category: 
BP

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