32347 CAS_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32347 chr_2 CAS_like superfamily 1112743 1114167 - CAS_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450368 Thaps32347.4, Thaps32347.3, Thaps32347.1, Thaps32347.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0422

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0055
 0.46

Most Highly Correlated Transcripts

bd410

(bd410) HNHc
0.9207

bd415

(bd415) arom_aa_hydroxylase superfamily
0.908

bd1841

(bd1841) CAP10 superfamily
0.8979

bd1808

(bd1808) NA
0.8464

bd884

(bd884) NA
0.8435

bd1941

(bd1941) NA
0.835

bd885

(bd885) NA
0.831

bd1954

(bd1954) NA
0.8077

bd1793

(bd1793) NA
0.8061

2865

hypothetical protein
0.8061

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Aldo_ket_red Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief... cl00470 94.163 2.58E-22 273 - 374 specific 119408
Aldo_ket_red superfamily Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief... - 94.163 2.58E-22 273 - 374 superfamily 260445
CAS_like superfamily Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG)... - 117.351 6.08E-30 3 - 243 superfamily 260242

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 416307 Not available AT3G21360.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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