32691 BTB
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32691 chr_3 BTB 1339594 1340568 - BTB

Synonyms

NCBI ID Ensembl Genomes exon ID
7441922 Thaps32691.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0112

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0037
 0.54

Most Highly Correlated Transcripts

270222

0.9225

bd1890

(bd1890) NA
0.8773

25231

hypothetical protein
0.7229

bd1835

(bd1835) NA
0.7214

3604

hypothetical protein
0.7213

bd885

(bd885) NA
0.7145

3126

plant_peroxidase_like superfamily
0.7101

25019

hypothetical protein
0.7067

bd153

(bd153) NA
0.7066

33915

Mito_carr
0.7042

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BTB Broad-Complex, Tramtrack and Bric a brac; Domain in Broad-Complex, Tramtrack and Bric a brac. Also... cl02518 63.4788 6.86E-13 68 - 153 specific 197585
BTB superfamily BTB/POZ domain; The BTB (for BR-C, ttk and bab) or POZ (for Pox virus and Zinc finger) domain is... - 63.4788 6.86E-13 68 - 153 superfamily 261320

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 11415 252569 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 GO:0005249 GO:0006813 GO:0008076 GO:0016020 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0005249

voltage-gated potassium channel activity

Details: 
Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
GO Category: 
MF

GO:0006813

potassium ion transport

Details: 
The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0008076

voltage-gated potassium channel complex

Details: 
A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential.
GO Category: 
CC

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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