32894 Ribosomal_L13
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
32894 chr_3 Ribosomal_L13 451238 451954 - Ribosomal_L13
NCBI ID Ensembl Genomes exon ID
7444033 Thaps32894.2, Thaps32894.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0267
SAICAR_synt_Sc
0.9457
DUF1077
0.9339
RimI
0.9247
Aldolase_II superfamily
0.9163
hypothetical protein
0.9162
rpsI
0.9148
(RT5) rpsE_bact
0.9137
DRG
0.9097
Zn-ribbon_RPC11
0.9096
PRK05279
0.9072
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L13 Ribosomal protein L13. Protein L13, a large ribosomal subunit protein, is one of five proteins... cl00333 178.082 2.28E-57 12 - 126 specific 238230
Ribosomal_L13 superfamily Ribosomal protein L13. Protein L13, a large ribosomal subunit protein, is one of five proteins... - 178.082 2.28E-57 12 - 126 superfamily 260361
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14713 PHATRDRAFT_14713 209815 253366 78136 Cre09.g405200.t1.2 AT3G01790.2 293849
KEGG description KEGG Pathway
Ribosome map03010
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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