32924 RPE
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32924 chr_3 RPE 2106663 2107346 - RPE

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps32924.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0015

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0288
 0.28

Most Highly Correlated Transcripts

270306

hypothetical protein
0.9994

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9807

bd1820

(bd1820) Fasciclin
0.9656

bd1306

(bd1306) NA
0.96

bd1863

(bd1863) NA
0.9598

bd1403

(bd1403) NA
0.9536

bd218

(bd218) Chloroa_b-bind superfamily
0.9489

35712

Phosphoglycerate_kinase
0.9482

bd1645

(bd1645) tpt
0.9411

21175

(TKT2) PLN02790
0.9395

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RPE Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-... cl17186 315.188 5.05E-109 4 - 219 specific 238244
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 315.188 5.05E-109 4 - 219 superfamily 266538

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 259733 66186 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004750 GO:0005975 -

GO:0004750

ribulose-phosphate 3-epimerase activity

Details: 
Catalysis of the reaction: D-ribulose 5-phosphate = D-xylulose 5-phosphate.
GO Category: 
MF

GO:0005975

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

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