32983 AcoBThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
32983	chr_3	AcoB	313493	314926	-	AcoB

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442486	Thaps32983.2, Thaps32983.1, Thaps32983.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0091

Most Highly Correlated Transcripts

bd1078 (bd1078) NA 0.9461	bd758 (bd758) NA 0.9182	bd687 (bd687) NA 0.9118	24525 hypothetical protein 0.9111	bd843 (bd843) NA 0.9091	bd846 (bd846) NA 0.906
bd890 (bd890) NA 0.8979	bd463 (bd463) Aa_trans superfamily 0.8899	bd1893 (bd1893) NA 0.8864	36007 Aldolase_II superfamily 0.8846

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TPP_enzyme_PYR superfamily		Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes; Thiamine...	-	136.454	4.05E-38	94 - 259	superfamily	264357
Transketolase_C superfamily		Transketolase, C-terminal domain; The C-terminal domain of transketolase has been proposed as a...	-	112.309	6.67E-30	287 - 398	superfamily	251527
Transketolase_C superfamily		Transketolase, C-terminal domain; The C-terminal domain of transketolase has been proposed as a...	-	112.309	6.67E-30	287 - 398	superfamily	251527
AcoB		Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta...	-	252.071	4.51E-80	89 - 417	multi-dom	223101

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004739 -

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