33242 TB2_DP1_HVA22
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33242 chr_3 TB2_DP1_HVA22 1686900 1687269 - TB2_DP1_HVA22

Synonyms

NCBI ID Ensembl Genomes exon ID
7449537 Thaps33242.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0143

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0060
 0.47

Most Highly Correlated Transcripts

bd1890

(bd1890) NA
0.8909

264670

Thioredoxin_like superfamily
0.8895

22844

Choline_transpo
0.8559

6534

DER1
0.8507

21429

hypothetical protein
0.849

13448

Sec1
0.8456

4007

MDR1
0.8446

23240

hypothetical protein
0.836

3922

hypothetical protein
0.834

10823

hypothetical protein
0.834

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TB2_DP1_HVA22 TB2/DP1, HVA22 family; This family includes members from a wide variety of eukaryotes. It includes... cl19882 108.424 2.02E-31 35 - 122 specific 251750
TB2_DP1_HVA22 superfamily TB2/DP1, HVA22 family; This family includes members from a wide variety of eukaryotes. It includes... - 108.424 2.02E-31 35 - 122 superfamily 268235

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46126 PHATRDRAFT_46126 275335 298961 Not available Not available AT4G24960.3 354597

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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