33256 ArsA_ATPase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33256 chr_3 ArsA_ATPase 1121924 1123855 + ArsA_ATPase

Synonyms

NCBI ID Ensembl Genomes exon ID
7451681 Thaps33256.3, Thaps33256.2, Thaps33256.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0482

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0007
 0.40

Most Highly Correlated Transcripts

bd616

(bd616) NA
0.883

bd1891

(bd1891) COG3899
0.825

bd409

(bd409) Snf7 superfamily
0.8125

bd1890

(bd1890) NA
0.799

bd824

(bd824) NA
0.7984

bd1885

(bd1885) NA
0.7976

bd1802

(bd1802) NA
0.7929

bd1835

(bd1835) NA
0.7862

bd1877

(bd1877) NA
0.7854

bd739

(bd739) NA
0.7825

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ArsA ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell. This ATP-driven... cl17203 157.408 2.54E-44 117 - 387 specific 238992
Fer4_NifH superfamily The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain.... - 157.408 2.54E-44 117 - 387 superfamily 266552
ArsA_ATPase Anion-transporting ATPase; This Pfam family represents a conserved domain, which is sometimes... - 248.809 5.54E-77 117 - 412 multi-dom 251258

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0006820 GO:0016020 GO:0015446 GO:0042961 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006820

anion transport

Details: 
The directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0015446

arsenite-transmembrane transporting ATPase activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + arsenite(in) = ADP + phosphate + arsenite(out).
GO Category: 
MF

GO:0042961

antimonite-transporting ATPase activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + antimonite(in) = ADP + phosphate + antimonite(out).
GO Category: 
MF

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