3353 FMN_dh
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3353 chr_3 FMN_dh 752234 753767 + FMN_dh

Synonyms

NCBI ID Ensembl Genomes exon ID
7444739 Thaps3353.1, Thaps3353.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0023

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0225
 0.26

Most Highly Correlated Transcripts

bd1765

(bd1765) NA
0.9539

bd218

(bd218) Chloroa_b-bind superfamily
0.9477

bd1387

(bd1387) psbE
0.9377

bd1078

(bd1078) NA
0.935

bd1820

(bd1820) Fasciclin
0.933

bd1304

(bd1304) Ycf4
0.9319

bd794

(bd794) NA
0.9291

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9254

bd1474

(bd1474) phytoene_desat
0.9244

260953

COG2423
0.924

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
alpha_hydroxyacid_oxid_FMN Family of homologous FMN-dependent alpha-hydroxyacid oxidizing enzymes. This family occurs in both... cl17186 352.135 3.81E-119 38 - 400 specific 239203
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 352.135 3.81E-119 38 - 400 superfamily 266538
FMN_dh FMN-dependent dehydrogenase; FMN-dependent dehydrogenase. - 410.005 5.06E-141 45 - 399 multi-dom 250340

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50804 PHATRDRAFT_50804 274468 203927 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006118 GO:0016491 GO:0003973 GO:0008891 GO:0009339 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0003973

(S)-2-hydroxy-acid oxidase activity

Details: 
Catalysis of the reaction: (S)-2-hydroxy-acid + O2 = 2-oxo acid + hydrogen peroxide.
GO Category: 
MF

GO:0008891

glycolate oxidase activity

Details: 
Catalysis of the reaction: glycolate + O2 = glyoxylate + hydrogen peroxide.
GO Category: 
MF

GO:0009339

glycolate oxidase complex

Details: 
An enzyme complex that catalyzes the oxidation of 2-hydroxy acid to form 2-oxo acid and hydrogen peroxide (H2O2). The enzyme is a flavoprotein (FMN).
GO Category: 
CC

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