33968 (CEN2) PTZ00183
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33968 chr_4 (CEN2) PTZ00183 794024 794580 - PTZ00183

Synonyms

NCBI ID Ensembl Genomes exon ID
7452654 Thaps33968.2, Thaps33968.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0360

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0083
 0.43

Most Highly Correlated Transcripts

bd524

(bd524) NA
0.8205

bd1807

(bd1807) RRS1 superfamily
0.783

bd1876

(bd1876) NatB_MDM20 superfamily
0.7261

22198

hypothetical protein
0.7241

bd1945

(bd1945) NA
0.722

262125

(NIR_2) PLN02431
0.7072

bd381

(bd381) NA
0.7011

bd1806

(bd1806) AAT_I superfamily
0.6901

42660

PLN02824
0.6672

bd686

(bd686) Glyco_transf_22 superfamily
0.6466

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 59.8689 7.97E-13 89 - 151 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 59.8689 7.97E-13 89 - 151 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 59.8689 7.97E-13 89 - 151 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 59.8689 7.97E-13 89 - 151 superfamily 238008
PTZ00183 centrin; Provisional - 207.234 1.49E-68 3 - 155 multi-dom 185503

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005509 GO:0001539 GO:0009288 -

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

GO:0001539

ciliary or bacterial-type flagellar motility

Details: 
Cell motility due to movement of cilia or flagella.
GO Category: 
BP

GO:0009288

bacterial-type flagellum

Details: 
A motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope.
GO Category: 
CC

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