34266 (RM17) rplQ
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
34266 chr_5 (RM17) rplQ 1643472 1643939 - rplQ
NCBI ID Ensembl Genomes exon ID
7448178 Thaps34266.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0011
hypothetical protein
0.9221
hypothetical protein
0.9051
(RM47) RM47, ribosomal protein 47 mitochondrial large ribosomal subunit
0.9042
SGNH_hydrolase superfamily
0.9009
DUF336
0.8914
hypothetical protein
0.8873
hypothetical protein
0.8859
nt_trans superfamily
0.8853
hypothetical protein
0.883
hypothetical protein
0.8821
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
rplQ 50S ribosomal protein L17; Validated cl00356 172.58 1.25E-55 8 - 118 specific 235522
Ribosomal_L17 superfamily Ribosomal protein L17; Ribosomal protein L17. - 172.58 1.25E-55 8 - 118 superfamily 260379
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_27659 PHATRDRAFT_27659 236331 318528 58287 Cre03.g181350.t1.1 AT5G09770.1 355044
KEGG description KEGG Pathway
Not available Not available
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
Log in to post comments