34681 FabZ
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34681 chr_6 FabZ 1517538 1518272 + FabZ

Synonyms

NCBI ID Ensembl Genomes exon ID
7453319 Thaps34681.2, Thaps34681.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0015

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0185
 0.25

Most Highly Correlated Transcripts

bd1306

(bd1306) NA
0.9766

bd1403

(bd1403) NA
0.9623

bd1820

(bd1820) Fasciclin
0.961

bd218

(bd218) Chloroa_b-bind superfamily
0.961

bd1645

(bd1645) tpt
0.9605

bd1342

(bd1342) psaL
0.9547

bd1387

(bd1387) psbE
0.953

bd718

(bd718) PRK10387
0.9506

31851

BKR_SDR_c
0.9506

bd1863

(bd1863) NA
0.9452

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the... cl00509 202.773 1.62E-66 75 - 203 specific 238615
hot_dog superfamily The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier... - 202.773 1.62E-66 75 - 203 superfamily 260469

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
10604 PHATRDRAFT_bd1143 PHATRDRAFT_bd1143 273974 300646 369379 Cre03.g208050.t1.2 AT5G10160.1 Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0003824 GO:0005737 GO:0006633 GO:0016836 GO:0008659 GO:0018128 GO:0018135 GO:0018807 GO:0018808 GO:0018809 GO:0018810 GO:0018811 GO:0018812 GO:0018813 GO:0018814 GO:0018815 GO:0018816 GO:0018817 GO:0018818 GO:0019171 GO:0046565 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0005737

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

GO:0006633

fatty acid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
GO Category: 
BP

GO:0016836

hydro-lyase activity

Details: 
Catalysis of the cleavage of a carbon-oxygen bond by elimination of water.
GO Category: 
MF

GO:0008659

(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity

Details: 
Catalysis of the reaction: (3R)-3-hydroxytetradecanoyl-[acyl-carrier protein] = tetradecenoyl-[acyl-carrier protein] + H2O.
GO Category: 
MF

GO:0018128

NA

Details: 
NA
GO Category: 
NA

GO:0018135

NA

Details: 
NA
GO Category: 
NA

GO:0018807

6-hydroxycyclohex-1-ene-1-carboxyl-CoA hydratase activity

Details: 
Catalysis of the reaction: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA + H2O = 2,6-dihydroxycyclohexane-1-carboxyl-CoA.
GO Category: 
MF

GO:0018808

trans-4-(1'-hydroxynaphth-2'-yl)-2-oxobut-3-enoate hydratase-aldolase activity

Details: 
Catalysis of the reaction: trans-4-(1'-hydroxynaphth-2'-yl)-2-oxobut-3-enoate + H2O = pyruvate + 1-hydroxy-2-naphthaldehyde.
GO Category: 
MF

GO:0018809

E-phenylitaconyl-CoA hydratase activity

Details: 
Catalysis of the reaction: E-phenylitaconyl-CoA + H2O = (hydroxymethylphenyl)succinyl-CoA.
GO Category: 
MF

GO:0018810

trans-4-[2-(3-hydroxy)-thionaphthenyl]-2-oxo-3-butenoate hydratase activity

Details: 
Catalysis of the reaction: trans-4-(2-(3-hydroxy)-thionaphthenyl)-2-oxo-3-butenoate + H2O = pyruvate + 3-hydroxy-2-formylbenzothiophene.
GO Category: 
MF

GO:0018811

cyclohex-1-ene-1-carboxyl-CoA hydratase activity

Details: 
Catalysis of the reaction: cyclohex-1-ene-1-carboxyl-CoA + H2O = 2-hydroxycyclohexane-1-carboxyl-CoA.
GO Category: 
MF

GO:0018812

3-hydroxyacyl-CoA dehydratase activity

Details: 
Catalysis of the reaction: alkene-CoA + H2O = alcohol-CoA. Substrates are crotonoyl-CoA (producing 3-hydroxyacyl-CoA) and 2,3-didehydro-pimeloyl-CoA (producing 3-hydroxypimeloyl-CoA).
GO Category: 
MF

GO:0018813

trans-o-hydroxybenzylidenepyruvate hydratase-aldolase activity

Details: 
Catalysis of the reaction: 2-oxo-3-enoate-4-benzenoid + H2O = pyruvate + benzaldehyde derivative. Substrates are (3E)-4-(5-amino-2-hydroxy-phenyl)-2-oxo-but-3-ene-1-oic-acid (forms 5-aminosalicylaldehyde) and trans-o-hydroxybenzylidenepyruvate (forms salicylaldehyde).
GO Category: 
MF

GO:0018814

phenylacetaldoxime dehydratase activity

Details: 
Catalysis of the reaction: (trans)-phenylacetaldoxime = H(2)O + phenylacetonitrile.
GO Category: 
MF

GO:0018815

3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon hydratase-aldolase activity

Details: 
Catalysis of the reaction: 3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon + H2O = 2-oxobut-3-enanoate + 2,5,6-trihydroxy-3-methylpyridine.
GO Category: 
MF

GO:0018816

2-hydroxyisobutyrate dehydratase activity

Details: 
Catalysis of the reaction: 2-hydroxyisobutyrate = H2O + methacrylate.
GO Category: 
MF

GO:0018817

2-oxo-hept-3-ene-1,7-dioate hydratase activity

Details: 
Catalysis of the reaction: cis-2-oxohept-3-ene-1,7-dioate + H2O = 2,4-dihydroxy-hept-trans-2-ene-1,7-dioate.
GO Category: 
MF

GO:0018818

acetylene hydratase activity

Details: 
Catalysis of the reaction: acetaldehyde = acetylene + H(2)O.
GO Category: 
MF

GO:0019171

3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity

Details: 
Catalysis of the reaction: a (3R)-3-hydroxyacyl-[acyl-carrier protein] = H2O + a trans-delta2-enoyl-acyl-[acyl-carrier protein].
GO Category: 
MF

GO:0046565

3-dehydroshikimate dehydratase activity

Details: 
Catalysis of the reaction: 3-dehydroshikimate = 3,4-dihydroxybenzoate + H2O. 3,4-dihydroxybenzoate is also known as protocatechuate.
GO Category: 
MF

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