34701 APG12_C
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
34701 chr_6 APG12_C 1936870 1937412 + APG12_C
NCBI ID Ensembl Genomes exon ID
7446557 Thaps34701.2, Thaps34701.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0120
0.7909
hypothetical protein
0.737
hypothetical protein
0.7141
(KAR3) NADB_Rossmann superfamily
0.7048
(Tp_Myb1R3) BDP1 superfamily
0.6866
hypothetical protein
0.6854
hypothetical protein
0.6787
hypothetical protein
0.6769
PKc_like superfamily
0.6763
Transglut_core
0.6746
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
APG12_C Ubiquitin-like domain of APG12; APG12_C The carboxy-terminal ubiquitin-like domain of APG12.... cl00155 127.002 2.78E-38 65 - 151 specific 176356
UBQ superfamily Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins.... - 127.002 2.78E-38 65 - 151 superfamily 260222
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 145146 124395 Not available Cre12.g557000.t1.2 AT1G54210.1 469530
KEGG description KEGG Pathway
Regulation of autophagy map04140
GO:0000045 GO:0005737 -

autophagic vacuole assembly

Details: 
The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm.
GO Category: 
BP

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC
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