34735 DRE_TIM_metallolyase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34735 chr_6 DRE_TIM_metallolyase superfamily 1512840 1514588 + DRE_TIM_metallolyase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7453317 Thaps34735.4, Thaps34735.2, Thaps34735.1, Thaps34735.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0224

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0165
 0.36

Most Highly Correlated Transcripts

23242

PRK00142
0.9286

34006

Sun
0.9216

21725

Brix superfamily
0.9195

268629

PseudoU_synth_RluCD_like
0.9147

32807

DEADc
0.9144

23210

hypothetical protein
0.9142

21553

Nop16 superfamily
0.9137

31465

Brix
0.9114

37327

tRNA_Me_trans
0.9088

22099

hypothetical protein
0.9082

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DRE_TIM_metallolyase superfamily DRE-TIM metallolyase superfamily; The DRE-TIM metallolyase superfamily includes 2-isopropylmalate... - 246.572 1.57E-76 126 - 424 superfamily 267315

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd636 PHATRDRAFT_bd636 223610 234404 53527 Cre01.g028450.t1.2 AT3G19630.1 468167

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0005506 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0005506

iron ion binding

Details: 
Interacting selectively and non-covalently with iron (Fe) ions.
GO Category: 
MF

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