21553 Nop16 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21553 chr_2 Nop16 superfamily 2454100 2454837 - Nop16 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452934 Thaps21553.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0224

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0276
 0.21

Most Highly Correlated Transcripts

21725

Brix superfamily
0.9486

31465

Brix
0.9361

25582

hypothetical protein
0.934

32807

DEADc
0.93

28755

NSA2
0.9299

40509

(RL30) Ribosomal_L24e_L24
0.9269

18198

RRM_NIFK_like
0.9254

28300

dimethyladenosine transferase
0.9233

22498

DEXDc superfamily
0.9187

22099

hypothetical protein
0.9185

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Nop16 superfamily Ribosome biogenesis protein Nop16; Nop16 is a protein involved in ribosome biogenesis. - 59.7128 3.26E-12 64 - 119 superfamily 255353

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32139 PHATRDRAFT_32139 237848 174606 Not available Not available Not available 249768

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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