34738 AAA_12 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34738 chr_6 AAA_12 superfamily 1648937 1649236 + AAA_12 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444569 Thaps34738.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0142

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0269
 0.41

Most Highly Correlated Transcripts

2107

hypothetical protein
0.8892

260965

ABC_ATPase
0.8883

36764

PRK05279
0.8842

32139

hypothetical protein
0.8806

1687

hypothetical protein
0.8801

2317

Mito_carr
0.8796

263327

MFS_1
0.8736

30701

PRK05279
0.8733

2985

hypothetical protein
0.8723

264670

Thioredoxin_like superfamily
0.872

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_12 superfamily AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 108.405 1.63E-30 21 - 70 superfamily 257490
COG1112 Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and... - 87.7092 3.02E-21 21 - 95 multi-dom 224037

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13582 PHATRDRAFT_13582 218348 237134 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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