34838 UBCc superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34838 chr_6 UBCc superfamily 77838 78653 - UBCc superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442322 Thaps34838.1, Thaps34838.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0428

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0248
 0.34

Most Highly Correlated Transcripts

bd1757

(bd1757) NA
0.8614

bd463

(bd463) Aa_trans superfamily
0.8518

bd1893

(bd1893) NA
0.8234

bd687

(bd687) NA
0.8117

bd1662

(bd1662) TIGR00367
0.8095

bd1758

(bd1758) NA
0.8034

bd758

(bd758) NA
0.8032

10788

Methyltransf_21
0.8018

12836

EEP superfamily
0.7985

264371

MFS
0.796

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UBCc superfamily Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated... - 92.7108 2.90E-24 13 - 146 superfamily 260221

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_20308 PHATRDRAFT_20308 274601 216385 416247 Cre05.g247600.t1.2 AT1G70660.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004840 GO:0006464 GO:0006512 -

GO:0004840

NA

Details: 
NA
GO Category: 
NA

GO:0006464

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

GO:0006512

NA

Details: 
NA
GO Category: 
NA

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