35133 (SIT3) Silic_transpThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
35133	chr_6	(SIT3) Silic_transp	1870258	1872055	+	Silic_transp

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444619	Thaps35133.1, Thaps35133.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0277

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0045	0.44

Most Highly Correlated Transcripts

25166 hypothetical protein 0.8333	22095 DUF726 superfamily 0.8198	263212 SCP superfamily 0.809	2215 SOUL 0.8071	21591 HtpX 0.7947	3387 hypothetical protein 0.7831
263873 Mito_carr 0.7784	8121 hypothetical protein 0.7773	6542 hypothetical protein 0.7773	23929 hypothetical protein 0.7732

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Silic_transp superfamily		Silicon transporter; Silicon transporter.	-	864.938	0	61 - 564	superfamily	146463
Silic_transp superfamily		Silicon transporter; Silicon transporter.	-	864.938	0	61 - 564	superfamily	146463

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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