35330 H4
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35330 chr_7 H4 399897 400208 + H4

Synonyms

NCBI ID Ensembl Genomes exon ID
7446208 Thaps35330.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0072

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0039
 0.52

Most Highly Correlated Transcripts

37431

PLN00157
0.8653

9067

(H4_1) H4
0.8387

3184

H4
0.8381

33270

PLN00157
0.8334

586

PTZ00018
0.8027

35404

PTZ00018
0.7968

12133

Trypan_PARP
0.7869

38391

hypothetical protein
0.783

6947

PLN00158
0.7752

37309

PLN00158
0.7743

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
H4 Histone H4, one of the four histones, along with H2A, H2B and H3, which forms the eukaryotic... cl00074 133.78 1.19E-41 18 - 101 specific 238031
H4 superfamily Histone H4, one of the four histones, along with H2A, H2B and H3, which forms the eukaryotic... - 133.78 1.19E-41 18 - 101 superfamily 260174

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000786 GO:0003677 GO:0005634 GO:0006334 GO:0007001 -

GO:0000786

nucleosome

Details: 
A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.
GO Category: 
CC

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006334

nucleosome assembly

Details: 
The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.
GO Category: 
BP

GO:0007001

NA

Details: 
NA
GO Category: 
NA

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