35356 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
35356	chr_7	ANK	1588954	1590948	+	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450718	Thaps35356.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0405

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0112	0.40	0.000000031 43000

Most Highly Correlated Transcripts

33724 PLN02856 0.8886	23952 hypothetical protein 0.8836	21655 hypothetical protein 0.8803	1017 hypothetical protein 0.8778	7299 hypothetical protein 0.8775	12645 MYSc 0.8755
2240 hypothetical protein 0.8727	261357 NAD_binding_8 superfamily 0.8656	37638 HrpA 0.8618	261261 ArfGap 0.8611

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	108.625	1.14E-27	539 - 649	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	108.625	1.14E-27	539 - 649	superfamily	238125
Ank_2		Ankyrin repeats (3 copies); Ankyrin repeats (3 copies).	-	77.2963	5.00E-17	541 - 627	multi-dom	257303

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Cre17.g735350.t1.1	Not available	526121

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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