35372 ASF1_hist_chapThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
35372	chr_7	ASF1_hist_chap	1797345	1797974	-	ASF1_hist_chap

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447194	Thaps35372.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0086

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0164	0.39	0.00025 3400

Most Highly Correlated Transcripts

bd439 (bd439) POLBc_alpha 0.8958	9247 hypothetical protein 0.868	20587 hypothetical protein 0.8618	2442 hypothetical protein 0.8605	bd718 (bd718) PRK10387 0.8588	4830 ADF_cofilin_like 0.8488
263366 Pkinase 0.848	22822 NTF2 0.8468	37328 PriL_PriS_Eukaryotic 0.8459	9238 hypothetical protein 0.8456

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ASF1_hist_chap		ASF1 like histone chaperone; This family includes the yeast and human ASF1 protein. These proteins...	cl19208	215.17	5.81E-71	1 - 145	specific	147073
SEEEED superfamily		Serine-rich region of AP3B1, clathrin-adaptor complex; This short low-complexity, highly serine-...	-	215.17	5.81E-71	1 - 145	superfamily	267561

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_52450	PHATRDRAFT_52450	144041	320863	67088	Cre08.g376350.t2.1	AT5G38110.1	354581

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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