36243 cyclophilin superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36243 chr_9 cyclophilin superfamily 449387 450230 - cyclophilin superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443532 Thaps36243.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0019

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0224
 0.27

Most Highly Correlated Transcripts

3071

NA
0.8894

5584

P4Hc
0.8892

33035

YGGT
0.8807

7696

2_5_RNA_ligase2
0.8764

7617

hypothetical protein
0.8732

23341

hypothetical protein
0.8732

41314

ETF_beta
0.8702

9907

hypothetical protein
0.8663

1000

hypothetical protein
0.8654

1850

PKc_like superfamily
0.8628

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
cyclophilin superfamily cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic... - 104.646 2.63E-27 108 - 278 superfamily 260252

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 143071 179090 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0003755

peptidyl-prolyl cis-trans isomerase activity

Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
GO Category: 
MF

GO:0004600

NA

Details: 
NA
GO Category: 
NA

GO:0030051

NA

Details: 
NA
GO Category: 
NA

GO:0042027

NA

Details: 
NA
GO Category: 
NA

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