33035 YGGT
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33035 chr_3 YGGT 1700203 1700811 - YGGT

Synonyms

NCBI ID Ensembl Genomes exon ID
7449540 Thaps33035.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0029

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0197
 0.29

Most Highly Correlated Transcripts

bd1161

(bd1161) NA
0.9487

bd718

(bd718) PRK10387
0.9372

23341

hypothetical protein
0.922

20285

COG0694
0.9184

264492

Peptidase_C1A
0.9153

261400

NA
0.9053

24343

hypothetical protein
0.9034

38331

YIP1 superfamily
0.9013

4353

O-FucT_like
0.901

40826

ER_lumen_recept
0.9004

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
YGGT YGGT family; This family consists of a repeat found in conserved hypothetical integral membrane... cl00508 69.7962 4.55E-16 97 - 168 specific 251224
YGGT superfamily YGGT family; This family consists of a repeat found in conserved hypothetical integral membrane... - 69.7962 4.55E-16 97 - 168 superfamily 260468

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_36034 PHATRDRAFT_36034 232638 172261 Not available Cre12.g557050.t1.2 AT5G21920.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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