36263 amt
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36263 chr_9 amt 393567 395292 - amt

Synonyms

NCBI ID Ensembl Genomes exon ID
7443521 Thaps36263.2, Thaps36263.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0189

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9156

25509

hypothetical protein
0.8765

5641

hypothetical protein
0.8736

2328

hypothetical protein
0.8684

24666

NUC superfamily
0.8673

25084

Bestrophin superfamily
0.8644

268943

MPP_PPP_family
0.8596

262459

Glyco_transf_22 superfamily
0.857

7332

hypothetical protein
0.8549

13448

Sec1
0.8482

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
amt ammonium transporter; The Ammonium Transporter (Amt) Family (TC 2.A.49) All functionally... cl03012 373.141 2.61E-124 49 - 473 specific 233145
Ammonium_transp superfamily Ammonium Transporter Family; Ammonium Transporter Family. - 373.141 2.61E-124 49 - 473 superfamily 261545

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006810 GO:0008519 GO:0016020 -

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0008519

ammonium transmembrane transporter activity

Details: 
Catalysis of the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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