36419 RabGAP-TBC
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36419 chr_10 RabGAP-TBC 740059 741679 - RabGAP-TBC

Synonyms

NCBI ID Ensembl Genomes exon ID
7450731 Thaps36419.1, Thaps36419.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0190

Most Highly Correlated Transcripts

30701

PRK05279
0.9389

268144

OTU
0.9346

13794

WD40
0.9329

32216

(RT5) rpsE_bact
0.9322

38736

S_TKc
0.9288

20763

CAF1
0.9288

36007

Aldolase_II superfamily
0.9261

10774

hypothetical protein
0.9255

261490

HemK
0.9235

8015

hypothetical protein
0.9206

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RabGAP-TBC Rab-GTPase-TBC domain; Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are... cl02495 166.776 3.71E-48 215 - 462 specific 249964
RabGAP-TBC superfamily Rab-GTPase-TBC domain; Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are... - 166.776 3.71E-48 215 - 462 superfamily 261308

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12157 PHATRDRAFT_12157 224010 204800 52549 Cre12.g486400.t1.2 AT2G30710.1 318886

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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