36709 WcaG
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36709 chr_11a WcaG 359389 360129 + WcaG

Synonyms

NCBI ID Ensembl Genomes exon ID
7443295 Thaps36709.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0071

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0117
 0.49

Most Highly Correlated Transcripts

1934

hypothetical protein
0.8743

5074

hypothetical protein
0.8735

268343

NA
0.8717

262977

NA
0.8692

260846

steroid binding protein 1
0.8597

31851

BKR_SDR_c
0.8488

25040

NA
0.8441

4516

hypothetical protein
0.8426

268192

Zip superfamily
0.8376

38306

Chloroa_b-bind
0.8372

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NAD_binding_10 NADH(P)-binding; NADH(P)-binding. cl09931 90.4452 3.30E-22 6 - 188 specific 257784
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 90.4452 3.30E-22 6 - 188 superfamily 263925
WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate... - 92.3125 3.10E-22 4 - 175 multi-dom 223528

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 455836 Cre03.g199150.t1.2 AT5G10730.1 349450

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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