36947 PBPb
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
36947 chr_12 PBPb 729390 732110 - PBPb
NCBI ID Ensembl Genomes exon ID
7447587 Thaps36947.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0317
(bd863) NA
0.7745
(bd655) NA
0.7447
hypothetical protein
0.7256
hypothetical protein
0.6894
hypothetical protein
0.6851
(MYB22)
0.6843
trmE
0.673
hypothetical protein
0.6646
hypothetical protein
0.6554
(bd1112) NA
0.6428
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PBPb superfamily Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-... - 75.4874 2.99E-15 410 - 620 superfamily 238078
PBPb superfamily Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-... - 75.4874 2.99E-15 410 - 620 superfamily 238078
PBPb Bacterial periplasmic substrate-binding proteins; bacterial proteins, eukaryotic ones are in PBPe - 94.7025 1.16E-21 397 - 620 multi-dom 214497
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0005215 GO:0006810 GO:0030288 -

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

outer membrane-bounded periplasmic space

Details: 
The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin cell wall.
GO Category: 
CC
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