37120 Yippee-Mis18
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37120 chr_13 Yippee-Mis18 107014 108146 + Yippee-Mis18

Synonyms

NCBI ID Ensembl Genomes exon ID
7452969 Thaps37120.1, Thaps37120.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0421

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0275
 0.38

Most Highly Correlated Transcripts

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9522

bd1841

(bd1841) CAP10 superfamily
0.9301

bd410

(bd410) HNHc
0.8805

2320

hypothetical protein
0.8803

bd690

(bd690) NA
0.8772

bd1756

(bd1756) NA
0.8669

bd1058

(bd1058) NA
0.8667

20984

hypothetical protein
0.8565

bd1839

(bd1839) NA
0.8545

bd884

(bd884) NA
0.8542

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Yippee-Mis18 superfamily Yippee zinc-binding/DNA-binding /Mis18, centromere assembly; This family includes both Yippee-type... - 76.5939 1.29E-17 135 - 225 superfamily 251810
Yippee-Mis18 superfamily Yippee zinc-binding/DNA-binding /Mis18, centromere assembly; This family includes both Yippee-type... - 76.5939 1.29E-17 135 - 225 superfamily 251810

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_8111 PHATRDRAFT_8111 206213 251252 47245 Cre08.g377550.t1.2 AT4G27745.1 350967

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

GO:0003755

peptidyl-prolyl cis-trans isomerase activity

Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
GO Category: 
MF

GO:0004600

NA

Details: 
NA
GO Category: 
NA

GO:0030051

NA

Details: 
NA
GO Category: 
NA

GO:0042027

NA

Details: 
NA
GO Category: 
NA

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