37458 COG0523
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37458 chr_14 COG0523 479893 481542 + COG0523

Synonyms

NCBI ID Ensembl Genomes exon ID
7451235 Thaps37458.3, Thaps37458.1, Thaps37458.4, Thaps37458.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0170

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0024
 0.39

Most Highly Correlated Transcripts

bd1835

(bd1835) NA
0.9215

bd692

(bd692) NA
0.8718

bd788

(bd788) NA
0.8498

36995

LplA
0.8371

bd1813

(bd1813) NA
0.8361

bd616

(bd616) NA
0.8322

bd824

(bd824) NA
0.8266

bd877

(bd877) NA
0.8228

bd815

(bd815) NA
0.8148

bd1946

(bd1946) NA
0.8049

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Fer4_NifH superfamily The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain.... - 180.144 2.08E-54 55 - 240 superfamily 266552
COG0523 Putative GTPases (G3E family) [General function prediction only] - 234.882 4.58E-73 54 - 438 multi-dom 223597

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_10239 PHATR_10239 191847 Not available Not available Cre01.g052000.t1.2 AT1G26520.1 246028

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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