3748 Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3748 chr_3 Mito_carr 1713509 1714635 + Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7451339 Thaps3748.2, Thaps3748.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0014

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0203
 0.30

Most Highly Correlated Transcripts

bd1095

(bd1095) NA
0.862

bd622

(bd622) NA
0.8606

bd1094

(bd1094) FH2 superfamily
0.8599

bd1809

(bd1809) ZnMc_pappalysin_like
0.8573

bd1081

(bd1081) NA
0.8573

bd886

(bd886) NA
0.8539

bd856

(bd856) NA
0.8479

bd1092

(bd1092) NA
0.8453

10092

hypothetical protein
0.8393

bd765

(bd765) NA
0.839

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.0295 4.84E-11 134 - 202 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.0295 4.84E-11 134 - 202 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.0295 4.84E-11 134 - 202 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.0295 4.84E-11 134 - 202 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.0295 4.84E-11 134 - 202 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.0295 4.84E-11 134 - 202 superfamily 249634

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_35949 PHATRDRAFT_35949 273896 198946 224593 Not available AT4G03115.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 GO:0005743 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005743

mitochondrial inner membrane

Details: 
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
GO Category: 
CC

Add comment

Log in to post comments