37739 COG4221
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37739 chr_15 COG4221 156868 157684 - COG4221

Synonyms

NCBI ID Ensembl Genomes exon ID
7444293 Thaps37739.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0218

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0028
 0.44

Most Highly Correlated Transcripts

10972

AdoMet_MTases
0.8946

37934

GRX_PICOT_like
0.8942

bd1813

(bd1813) NA
0.8829

24373

hypothetical protein
0.8767

42380

RRM_ist3_like
0.8715

22958

hypothetical protein
0.8705

1626

Acid_PPase superfamily
0.8655

821

(VPS4) AAA
0.8644

32610

hypothetical protein
0.8637

3879

hypothetical protein
0.8635

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SDR_c classical (c) SDRs; SDRs are a functionally diverse family of oxidoreductases that have a single... cl09931 183.639 1.13E-56 20 - 255 specific 212491
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 183.639 1.13E-56 20 - 255 superfamily 263925
COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] - 218.661 5.06E-70 13 - 271 multi-dom 226674

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 207668 300288 452872 Not available AT5G10050.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004743 GO:0006096 GO:0008152 GO:0016491 GO:0051341 -

GO:0004743

pyruvate kinase activity

Details: 
Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate.
GO Category: 
MF

GO:0006096

glycolysis

Details: 
The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Glycolysis begins with phosphorylation of a monosaccharide (generally glucose) on the sixth carbon by a hexokinase, and ends with the production of pyruvate. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle.
GO Category: 
BP

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0051341

regulation of oxidoreductase activity

Details: 
Any process that modulates the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
BP

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