37740 MATE_eukaryotic
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37740 chr_15 MATE_eukaryotic 275120 276996 - MATE_eukaryotic

Synonyms

NCBI ID Ensembl Genomes exon ID
7444312 Thaps37740.1, Thaps37740.3, Thaps37740.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0437

Most Highly Correlated Transcripts

13335

DEADc
0.9042

16114

PLN02350
0.9015

21464

BTB
0.8974

2154

hypothetical protein
0.8949

10487

hypothetical protein
0.8923

40929

SrmB
0.8814

13448

Sec1
0.8798

21705

hypothetical protein
0.8794

264391

MPP_superfamily superfamily
0.8792

6630

hypothetical protein
0.8784

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MATE_eukaryotic Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family; The integral... cl09326 346.482 1.52E-113 77 - 524 specific 240537
MATE_like superfamily Multidrug and toxic compound extrusion family and similar proteins; The integral membrane proteins... - 346.482 1.52E-113 77 - 524 superfamily 263758
NorM Na+-driven multidrug efflux pump [Defense mechanisms] - 205.921 8.03E-60 77 - 522 multi-dom 223608

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 265819 145086 52721 Not available Not available 507765

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006855 GO:0015238 GO:0015297 GO:0016020 -

GO:0006855

drug transmembrane transport

Details: 
The process in which a drug is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0015238

drug transmembrane transporter activity

Details: 
Enables the directed movement of a drug from one side of a membrane to the other. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
GO Category: 
MF

GO:0015297

antiporter activity

Details: 
Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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