37819 ESCRT-II superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37819 chr_16a ESCRT-II superfamily 436931 437896 + ESCRT-II superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442556 Thaps37819.1, Thaps37819.2, Thaps37819.4, Thaps37819.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0262

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9303

21910

hypothetical protein
0.8661

30533

Kin17_mid
0.866

3690

AdoMet_MTases
0.8643

10441

hypothetical protein
0.8629

3539

hypothetical protein
0.8596

6539

hypothetical protein
0.859

1818

hypothetical protein
0.8589

21220

KU superfamily
0.8562

bd935

(bd935) TFIIS_I
0.851

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ESCRT-II superfamily ESCRT-II complex subunit; This family of conserved eukaryotic proteins are subunits of the endosome... - 153.968 1.24E-47 12 - 147 superfamily 253433

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_38893 PHATRDRAFT_38893 197871 324482 Not available Cre02.g076400.t1.2 AT4G19003.1 535674

KEGG

KEGG description KEGG Pathway
Endocytosis map04144

GO Terms

Not available -

Add comment

Log in to post comments