38071 COG2220
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38071 chr_18 COG2220 411165 413429 + COG2220

Synonyms

NCBI ID Ensembl Genomes exon ID
7444281 Thaps38071.2, Thaps38071.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0111

Most Highly Correlated Transcripts

39973

(GPI3) PLN02649
0.8874

24503

hypothetical protein
0.8828

22367

MPP_superfamily superfamily
0.8827

264678

CysJ
0.8773

1602

DUF974 superfamily
0.8753

268062

PRK14293
0.8706

27773

CAP_ED
0.8706

4524

DHQS
0.8688

21193

UBL
0.8652

bd1934

(bd1934) NA
0.8637

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only] cl00446 152.674 9.22E-42 369 - 659 specific 225130
Lactamase_B superfamily Metallo-beta-lactamase superfamily; Metallo-beta-lactamase superfamily. - 152.674 9.22E-42 369 - 659 superfamily 260426

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd174 PHATRDRAFT_bd174 141573 208526 Not available Cre01.g007300.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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