4147 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4147 chr_4 hypothetical protein 299719 303349 - hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7442068 Thaps4147.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0092

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0221
 0.14

Most Highly Correlated Transcripts

bd1173

(bd1173) S_TKc
0.9742

bd765

(bd765) NA
0.9742

24064

hypothetical protein
0.9741

1201

hypothetical protein
0.974

1055

hypothetical protein
0.9722

10654

hypothetical protein
0.9713

1202

hypothetical protein
0.9709

11130

hypothetical protein
0.9695

36911

Rhomboid
0.9691

6330

hypothetical protein
0.9664

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 GO:0005509 GO:0004308 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

GO:0004308

exo-alpha-sialidase activity

Details: 
Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
GO Category: 
MF

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