42332 (RS29) Ribosomal_S14 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
42332 chr_14 (RS29) Ribosomal_S14 superfamily 243386 244259 - Ribosomal_S14 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450850 Thaps42332.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0046

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0205
 0.26

Most Highly Correlated Transcripts

31796

(RL39) Ribosomal_L39
0.9642

31277

(RS30) Ribosomal_S30
0.9487

39499

(RL14) Ribosomal_L14e
0.9432

22350

(RS21) Ribosomal_S21e
0.936

26250

(RL26) KOW_RPL26
0.9296

33977

(RL36) Ribosomal_L36e
0.9226

32675

(RS15B) PTZ00096
0.9184

24410

(RL32) Ribosomal_L32_L32e
0.9139

25949

(RL11A) PTZ00156
0.9116

26383

PTZ00255
0.9023

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_S14 superfamily Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 from... - 70.8693 4.33E-18 7 - 61 superfamily 260378

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_28147 PHATR_28147 272594 309054 372560 Cre08.g358556.t1.1 AT4G33865.1 504947

KEGG

KEGG description KEGG Pathway
Ribosome map03010

GO Terms

Not available -

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