4349 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
4349	chr_4	ANK	807420	808767	-	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447902	Thaps4349.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0053

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0053	0.56

Most Highly Correlated Transcripts

2154 hypothetical protein 0.8675	35136 NA 0.8579	30701 PRK05279 0.8569	24133 hypothetical protein 0.8519	10487 hypothetical protein 0.8495	264556 FBPase 0.845
6630 hypothetical protein 0.845	32468 STKc_CDC2L1 0.8432	3180 hypothetical protein 0.8365	2540 hypothetical protein 0.8335

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	69.7198	2.12E-14	297 - 413	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	69.7198	2.12E-14	297 - 413	superfamily	238125

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_34708	PHATRDRAFT_34708	154406	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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