4441 GlcNAc superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4441 chr_4 GlcNAc superfamily 1031123 1033461 - GlcNAc superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447945 Thaps4441.2, Thaps4441.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0188

Most Highly Correlated Transcripts

1674

hypothetical protein
0.9158

34590

nt_trans superfamily
0.9101

12836

EEP superfamily
0.9044

3161

hypothetical protein
0.9036

4333

hypothetical protein
0.8927

7898

DUF676 superfamily
0.8925

21220

KU superfamily
0.8922

2580

AarF
0.8907

22265

hypothetical protein
0.8906

20720

acyl_WS_DGAT
0.8901

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GlcNAc superfamily Glycosyltransferase (GlcNAc); GlcNAc is an enzyme that carries out the first glycosylation step of... - 241.08 1.14E-72 391 - 701 superfamily 256446
2OG-FeII_Oxy_3 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... cl17304 70.5306 1.60E-14 216 - 337 specific 257950
2OG-FeII_Oxy_3 superfamily 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... - 70.5306 1.60E-14 216 - 337 superfamily 266616

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 159683 123963 453190 Cre02.g119651.t1.2 Not available 506080

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016706 GO:0019538 -

GO:0016706

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

Details: 
Catalysis of the reaction: A + 2-oxoglutarate + O2 = B + succinate + CO2. This is an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor.
GO Category: 
MF

GO:0019538

protein metabolic process

Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.
GO Category: 
BP

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