4914 PLN03116
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4914 chr_4 PLN03116 2260018 2262148 - PLN03116

Synonyms

NCBI ID Ensembl Genomes exon ID
7452257 Thaps4914.2, Thaps4914.3, Thaps4914.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0015

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0204
 0.18

Most Highly Correlated Transcripts

bd1306

(bd1306) NA
0.9709

bd1645

(bd1645) tpt
0.9669

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9655

bd1820

(bd1820) Fasciclin
0.9618

40156

F1-ATPase_gamma
0.9581

35878

PLN02307
0.9568

bd208

(bd208) DUF3529
0.9548

bd1403

(bd1403) NA
0.9457

23283

hypothetical protein
0.9448

25892

PLN03116
0.9437

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CYPOR_like_FNR These ferredoxin reductases are related to the NADPH cytochrome p450 reductases (CYPOR), but lack... cl06868 474.117 2.67E-168 71 - 361 specific 99804
FNR_like superfamily Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a... - 474.117 2.67E-168 71 - 361 superfamily 263080
PLN03116 ferredoxin--NADP+ reductase; Provisional - 635.601 0 56 - 361 multi-dom 215586

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 275587 55817 432385 Cre11.g476750.t1.2 AT4G05390.1 Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0006118 GO:0016491 GO:0004324 GO:0015039 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004324

ferredoxin-NADP+ reductase activity

Details: 
Catalysis of the reaction: reduced ferredoxin + NADP+ = oxidized ferredoxin + NADPH + H+.
GO Category: 
MF

GO:0015039

NADPH-adrenodoxin reductase activity

Details: 
Catalysis of the reaction: oxidized adrenodoxin + NADPH + H+ = reduced adrenodoxin + NADP+.
GO Category: 
MF

Add comment

Log in to post comments